J Craig Venter Institute

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Founded in 1992, J. Craig Venter Institute is a not-for-profit research institute whose primary research interests are in structural, functional and comparative analysis of genomes and gene products from a wide variety of organisms

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J Craig Venter Institute's Articles

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Page 9 of 10

The complete chloroplast genome sequence of Gossypium hirsutum: organization and phylogenetic relationships to other angiosperms

Authors: Seung-Bum Lee, Charalambos Kaittanis, Robert K Jansen, Jessica B Hostetler, Luke J Tallon, Christopher D Town and Henry Daniell

Citation: BMC Genomics 2006 7:61

Content type: Research article

Published on: 23 March 2006
Trypanosoma cruzi mitochondrial maxicircles display species- and strain-specific variation and a conserved element in the non-coding region

Authors: Scott J Westenberger, Gustavo C Cerqueira, Najib M El-Sayed, Bianca Zingales, David A Campbell and Nancy R Sturm

Citation: BMC Genomics 2006 7:60

Content type: Research article

Published on: 22 March 2006
Lineage-specific expansion of proteins exported to erythrocytes in malaria parasites

Authors: Tobias J Sargeant, Matthias Marti, Elisabet Caler, Jane M Carlton, Ken Simpson, Terence P Speed and Alan F Cowman

Citation: Genome Biology 2006 7:R12

Content type: Research

Published on: 20 February 2006
Similarity-based gene detection: using COGs to find evolutionarily-conserved ORFs

Authors: Bradford C Powell and Clyde A Hutchison III

Citation: BMC Bioinformatics 2006 7:31

Content type: Methodology article

Published on: 19 January 2006
Molecular processes during fat cell development revealed by gene expression profiling and functional annotation

Authors: Hubert Hackl, Thomas Rainer Burkard, Alexander Sturn, Renee Rubio, Alexander Schleiffer, Sun Tian, John Quackenbush, Frank Eisenhaber and Zlatko Trajanoski

Citation: Genome Biology 2005 6:R108

Content type: Research

Published on: 19 December 2005
Comparative analysis of programmed cell death pathways in filamentous fungi

Authors: Natalie D Fedorova, Jonathan H Badger, Geoff D Robson, Jennifer R Wortman and William C Nierman

Citation: BMC Genomics 2005 6:177

Content type: Research article

Published on: 8 December 2005
Bacterial genome adaptation to niches: Divergence of the potential virulence genes in three Burkholderia species of different survival strategies

Authors: H Stanley Kim, Mark A Schell, Yan Yu, Ricky L Ulrich, Saul H Sarria, William C Nierman and David DeShazer

Citation: BMC Genomics 2005 6:174

Content type: Research article

Published on: 7 December 2005
Microbial metagenomics

Authors: Emmanuel F Mongodin, Joanne B Emerson and Karen E Nelson

Citation: Genome Biology 2005 6:347

Content type: Meeting report

Published on: 27 September 2005
Comparative analyses of six solanaceous transcriptomes reveal a high degree of sequence conservation and species-specific transcripts

Authors: Willem Albert Rensink, Yuandan Lee, Jia Liu, Stacy Iobst, Shu Ouyang and C Robin Buell

Citation: BMC Genomics 2005 6:124

Content type: Research article

Published on: 14 September 2005
Mimivirus relatives in the Sargasso sea

Authors: Elodie Ghedin and Jean-Michel Claverie

Citation: Virology Journal 2005 2:62

Content type: Research

Published on: 16 August 2005
Highly syntenic regions in the genomes of soybean, Medicago truncatula, and Arabidopsis thaliana

Authors: Joann Mudge, Steven B Cannon, Peter Kalo, Giles ED Oldroyd, Bruce A Roe, Christopher D Town and Nevin D Young

Citation: BMC Plant Biology 2005 5:15

Content type: Research article

Published on: 15 August 2005
Complete reannotation of the Arabidopsis genome: methods, tools, protocols and the final release

Authors: Brian J Haas, Jennifer R Wortman, Catherine M Ronning, Linda I Hannick, Roger K Smith Jr, Rama Maiti, Agnes P Chan, Chunhui Yu, Maryam Farzad, Dongying Wu, Owen White and Christopher D Town

Citation: BMC Biology 2005 3:7

Content type: Research article

Published on: 22 March 2005
New evolutionary frontiers from unusual virus genomes

Authors: Christopher Desjardins, Jonathan A Eisen and Vishvanath Nene

Citation: Genome Biology 2005 6:212

Content type: Minireview

Published on: 2 March 2005
Tumor microenvironments, the immune system and cancer survival

Authors: Robert L Strausberg

Citation: Genome Biology 2005 6:211

Content type: Minireview

Published on: 1 March 2005
A robust method for the amplification of RNA in the sense orientation

Authors: Nicholas F Marko, Bryan Frank, John Quackenbush and Norman H Lee

Citation: BMC Genomics 2005 6:27

Content type: Methodology article

Published on: 1 March 2005
Serendipitous discovery of Wolbachia genomes in multiple Drosophilaspecies

Authors: Steven L Salzberg, Julie C Dunning Hotopp, Arthur L Delcher, Mihai Pop, Douglas R Smith, Michael B Eisen and William C Nelson

Citation: Genome Biology 2005 6:R23

Content type: Research

Published on: 22 February 2005

The Erratum to this article has been published in Genome Biology 2005 6:402
Ways to get from plant genomes to phenomes: via yeast

Authors: Pablo D Rabinowicz and Willem Rensink

Citation: Genome Biology 2005 6:310

Content type: Meeting report

Published on: 15 February 2005
Efficient decoding algorithms for generalized hidden Markov model gene finders

Authors: William H Majoros, Mihaela Pertea, Arthur L Delcher and Steven L Salzberg

Citation: BMC Bioinformatics 2005 6:16

Content type: Software

Published on: 24 January 2005
Visualization of comparative genomic analyses by BLAST score ratio

Authors: David A Rasko, Garry SA Myers and Jacques Ravel

Citation: BMC Bioinformatics 2005 6:2

Content type: Software

Published on: 5 January 2005
An empirical analysis of training protocols for probabilistic gene finders

Authors: William H Majoros and Steven L Salzberg

Citation: BMC Bioinformatics 2004 5:206

Content type: Research article

Published on: 21 December 2004

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J Craig Venter Institute

J Craig Venter Institute's Articles

The complete chloroplast genome sequence of Gossypium hirsutum: organization and phylogenetic relationships to other angiosperms

Trypanosoma cruzi mitochondrial maxicircles display species- and strain-specific variation and a conserved element in the non-coding region

Lineage-specific expansion of proteins exported to erythrocytes in malaria parasites

Similarity-based gene detection: using COGs to find evolutionarily-conserved ORFs

Molecular processes during fat cell development revealed by gene expression profiling and functional annotation

Comparative analysis of programmed cell death pathways in filamentous fungi

Bacterial genome adaptation to niches: Divergence of the potential virulence genes in three Burkholderia species of different survival strategies

Microbial metagenomics

Comparative analyses of six solanaceous transcriptomes reveal a high degree of sequence conservation and species-specific transcripts

Mimivirus relatives in the Sargasso sea

Highly syntenic regions in the genomes of soybean, Medicago truncatula, and Arabidopsis thaliana

Complete reannotation of the Arabidopsis genome: methods, tools, protocols and the final release

New evolutionary frontiers from unusual virus genomes

Tumor microenvironments, the immune system and cancer survival

A robust method for the amplification of RNA in the sense orientation

Serendipitous discovery of Wolbachia genomes in multiple Drosophilaspecies

Ways to get from plant genomes to phenomes: via yeast

Efficient decoding algorithms for generalized hidden Markov model gene finders

Visualization of comparative genomic analyses by BLAST score ratio

An empirical analysis of training protocols for probabilistic gene finders