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Massachusetts Institute of Technology (MIT)'s Articles

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Page 22 of 24

CellProfiler: image analysis software for identifying and quantifying cell phenotypes

Authors: Anne E Carpenter, Thouis R Jones, Michael R Lamprecht, Colin Clarke, In Han Kang, Ola Friman, David A Guertin, Joo Han Chang, Robert A Lindquist, Jason Moffat, Polina Golland and David M Sabatini

Citation: Genome Biology 2006 7:R100

Content type: Software

Published on: 31 October 2006
Paradoxical expression of INK4c in proliferative multiple myeloma tumors: bi-allelic deletion vs increased expression

Authors: Amel Dib, Timothy R Peterson, Laura Raducha-Grace, Adriana Zingone, Fenghuang Zhan, Ichiro Hanamura, Bart Barlogie, John Shaughnessy Jr and W Michael Kuehl

Citation: Cell Division 2006 1:23

Content type: Research

Published on: 18 October 2006
fMRI-compatible rehabilitation hand device

Authors: Azadeh Khanicheh, Andrew Muto, Christina Triantafyllou, Brian Weinberg, Loukas Astrakas, Aria Tzika and Constantinos Mavroidis

Citation: Journal of NeuroEngineering and Rehabilitation 2006 3:24

Content type: Research

Published on: 6 October 2006
Efficient pairwise RNA structure prediction and alignment using sequence alignment constraints

Authors: Robin D Dowell and Sean R Eddy

Citation: BMC Bioinformatics 2006 7:400

Content type: Methodology article

Published on: 4 September 2006
Nonassociative learning as gated neural integrator and differentiator in stimulus-response pathways

Authors: Chi-Sang Poon and Daniel L Young

Citation: Behavioral and Brain Functions 2006 2:29

Content type: Review

Published on: 8 August 2006
Zebrafish promoter microarrays identify actively transcribed embryonic genes

Authors: Fiona C Wardle, Duncan T Odom, George W Bell, Bingbing Yuan, Timothy W Danford, Elizabeth L Wiellette, Elizabeth Herbolsheimer, Hazel L Sive, Richard A Young and James C Smith

Citation: Genome Biology 2006 7:R71

Content type: Method

Published on: 4 August 2006
Improved alignment quality by combining evolutionary information, predicted secondary structure and self-organizing maps

Authors: Tomas Ohlson, Varun Aggarwal, Arne Elofsson and Robert M MacCallum

Citation: BMC Bioinformatics 2006 7:357

Content type: Methodology article

Published on: 25 July 2006
A physico-chemical survey of inland lakes and saline ponds: Christmas Island (Kiritimati) and Washington (Teraina) Islands, Republic of Kiribati

Authors: Casey Saenger, Michael Miller, Rienk H Smittenberg and Julian P Sachs

Citation: Saline Systems 2006 2:8

Content type: Research

Published on: 3 July 2006
A zebrafish screen for craniofacial mutants identifies wdr68 as a highly conserved gene required for endothelin-1 expression

Authors: Robert M Nissen, Adam Amsterdam and Nancy Hopkins

Citation: BMC Developmental Biology 2006 6:28

Content type: Research article

Published on: 7 June 2006
RNA interference has a role in regulating Drosophilatelomeres

Authors: Elena Casacuberta and Mary-Lou Pardue

Citation: Genome Biology 2006 7:220

Content type: Minireview

Published on: 31 May 2006
The short coiled-coil domain-containing protein UNC-69 cooperates with UNC-76 to regulate axonal outgrowth and normal presynaptic organization in Caenorhabditis elegans

Authors: Cheng-Wen Su, Suzanne Tharin, Yishi Jin, Bruce Wightman, Mona Spector, David Meili, Nancy Tsung, Christa Rhiner, Dimitris Bourikas, Esther Stoeckli, Gian Garriga, H Robert Horvitz and Michael O Hengartner

Citation: Journal of Biology 2006 5:9

Content type: Research article

Published on: 25 May 2006
GenePING: secure, scalable management of personal genomic data

Authors: Ben Adida and Isaac S Kohane

Citation: BMC Genomics 2006 7:93

Content type: Software

Published on: 26 April 2006
Phylogenetic and structural analysis of centromeric DNA and kinetochore proteins

Authors: Patrick Meraldi, Andrew D McAinsh, Esther Rheinbay and Peter K Sorger

Citation: Genome Biology 2006 7:R23

Content type: Research

Published on: 22 March 2006
An improved map of conserved regulatory sites for Saccharomyces cerevisiae

Authors: Kenzie D MacIsaac, Ting Wang, D Benjamin Gordon, David K Gifford, Gary D Stormo and Ernest Fraenkel

Citation: BMC Bioinformatics 2006 7:113

Content type: Research article

Published on: 7 March 2006
Computational models with thermodynamic and composition features improve siRNA design

Authors: Svetlana A Shabalina, Alexey N Spiridonov and Aleksey Y Ogurtsov

Citation: BMC Bioinformatics 2006 7:65

Content type: Methodology article

Published on: 12 February 2006
OpWise: Operons aid the identification of differentially expressed genes in bacterial microarray experiments

Authors: Morgan N Price, Adam P Arkin and Eric J Alm

Citation: BMC Bioinformatics 2006 7:19

Content type: Software

Published on: 13 January 2006
Using Topology of the Metabolic Network to Predict Viability of Mutant Strains

Authors: Zeba Wunderlich and Leonid Mirny

Citation: Genome Biology 2005 6:P15

Content type: Deposited research article

Published on: 28 December 2005
Substrate specificity analysis of protein kinase complex Dbf2-Mob1 by peptide library and proteome array screening

Authors: Angie S Mah, Andrew EH Elia, Geeta Devgan, Jason Ptacek, Mike Schutkowski, Michael Snyder, Michael B Yaffe and Raymond J Deshaies

Citation: BMC Biochemistry 2005 6:22

Content type: Research article

Published on: 21 October 2005
A software tool for creating simulated outbreaks to benchmark surveillance systems

Authors: Christopher A Cassa, Karin Iancu, Karen L Olson and Kenneth D Mandl

Citation: BMC Medical Informatics and Decision Making 2005 5:22

Content type: Software

Published on: 14 July 2005
Regulation of mouse hepatic genes in response to diet induced obesity, insulin resistance and fasting induced weight reduction

Authors: R Michael Raab, John Bullen, Joanne Kelleher, Christos Mantzoros and Gregory Stephanopoulos

Citation: Nutrition & Metabolism 2005 2:15

Content type: Research

Published on: 28 June 2005

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Massachusetts Institute of Technology (MIT)

Massachusetts Institute of Technology (MIT)'s Articles

CellProfiler: image analysis software for identifying and quantifying cell phenotypes

Paradoxical expression of INK4c in proliferative multiple myeloma tumors: bi-allelic deletion vs increased expression

fMRI-compatible rehabilitation hand device

Efficient pairwise RNA structure prediction and alignment using sequence alignment constraints

Nonassociative learning as gated neural integrator and differentiator in stimulus-response pathways

Zebrafish promoter microarrays identify actively transcribed embryonic genes

Improved alignment quality by combining evolutionary information, predicted secondary structure and self-organizing maps

A physico-chemical survey of inland lakes and saline ponds: Christmas Island (Kiritimati) and Washington (Teraina) Islands, Republic of Kiribati

A zebrafish screen for craniofacial mutants identifies wdr68 as a highly conserved gene required for endothelin-1 expression

RNA interference has a role in regulating Drosophilatelomeres

The short coiled-coil domain-containing protein UNC-69 cooperates with UNC-76 to regulate axonal outgrowth and normal presynaptic organization in Caenorhabditis elegans

GenePING: secure, scalable management of personal genomic data

Phylogenetic and structural analysis of centromeric DNA and kinetochore proteins

An improved map of conserved regulatory sites for Saccharomyces cerevisiae

Computational models with thermodynamic and composition features improve siRNA design

OpWise: Operons aid the identification of differentially expressed genes in bacterial microarray experiments

Using Topology of the Metabolic Network to Predict Viability of Mutant Strains

Substrate specificity analysis of protein kinase complex Dbf2-Mob1 by peptide library and proteome array screening

A software tool for creating simulated outbreaks to benchmark surveillance systems

Regulation of mouse hepatic genes in response to diet induced obesity, insulin resistance and fasting induced weight reduction